Righto, my last word on this (i sincerely hope). I'll post it in both threads so subscribers to both will see it.
After some great advice from member of this forum and some further digging with Sanyo, SMA and Fronuis we have been able to close this issue off.
As has been suggested by members here the large instantaneous drop in voltage caused by the operation of the by-pass diode on the Sanyo H-Series panel drops the array voltage outside the MPP trackers scanning range causing it to get stuck on a false peak. Its is particularly problematic with the H-series due to the large number of cells in the two end sections. See image:
View attachment By-pass configurantion H, N.pdf
I have been told that SMA's opti-trac was developed as a direct result of this known issue with their tracker. It is worth noting that this information did not come from SMA, they denied all along that the problem was anything to do with their product, they did not advise us to try optitrac when it became available and as far as i know did not release any info publicly in response to a problem that was being reported several time a day at its peak.
Fronuis were unable to offer an update similar to optitrac as they have not had the problem frequently enough to warrant it. We have now installed the third 3000HF, this time with opti-trac and the problem has been resolved.
I must be clear that this is not a fault with the panels or inverters as such, they work as they are designed to. The problem is one of compatibility, a specific panel, inverter and shade combination is the cause and removing any one of the three will resolve the issue. Opti-trac rescans at set intervals and therefor doesn't allow the tracking of a false peak.
I'm glad to have this resolved finally and would like to thank everyone of the forum who offered advice and also SMA, Fronuis and Sanyo for taking it seriously and coming up with some answers.
Finally i would advise anyone with H series panels and hard shading to monitor their system closely, part shading doesn't automatically mean poor performance and we have seen the system perform at near peak with the shading when the tracker is working correctly.
If you are considering PV and you have a shading issue get a quote from an installer who uses PV-Sol or equivalent who can model the system and quantify the imact the shading will have. I do wonder how many other systems are out there with this issue that has yet to be noticed.
Over and out...